MOLECULE

mŏlˈəkyool [New Lat.,=little mass], smallest particle of a compound that has all the chemical properties of that compound. A single atom is usually not referred to as a molecule, and ionic compounds such as common salt are not made up of molecules. Unlike ions, molecules carry no electrical charge.

Nature of Molecules

Molecules are made up of two or more atoms, either of the same element or of two or more different elements, joined by one or more covalent chemical bonds. According to the kinetic-molecular theory, the molecules of a substance are in constant motion. The state (solid, liquid, or gaseous) in which matter appears depends on the speed and separation of the molecules in the matter. Substances differ according to the structure and composition of their molecules. A molecular compound is represented by its molecular formula; for example, water is represented by the formula H2O. A more complex structural formula is sometimes used to show the arrangement of atoms in the molecule.

Molecules differ in size and molecular weight as well as in structure. In a chemical reaction between molecular substances, the molecules are often broken apart into atoms or radicals that recombine to form other molecules, i.e., other substances. In other cases two or more molecules will combine to form a single larger molecule, or a large molecule will be broken up into several smaller molecules.

Molecules can assume many shapes and sizes. Molecules of hydrogen gas, H2, are very small; each consists of two atoms of hydrogen. Water molecules, H2O, are much larger, containing an atom of oxygen as well as two of hydrogen. The atoms in a water molecule are arranged at the corners of an isosceles triangle; the oxygen atom is located where the two equal sides meet and the angle between these sides is about 105°. A carbon dioxide molecule, CO2, is linear, with the two oxygen atoms an equal distance on either side of the carbon atom. In methane, CH4, the hydrogen atoms are arranged at the corners of a tetrahedron with the carbon atom in the center. In benzene, C6H6, the carbon atoms form a hexagonal ring with a hydrogen atom joined to each carbon atom. More complex molecules resemble rings, chains, helices, or other forms. Many molecules occurring in living organisms are very complex. RNA and DNA molecules resemble giant helices. By polymerization a large number of small molecules may be joined to form a single large polymer molecule. Typical polymers include synthetic resins, rubbers, and plastics.

Evolution of Molecular Theory

The terms atom and molecule were used interchangeably until the early 19th cent. Initial experimental work with gases led to what is essentially the modern distinction. J. A. C. Charles and R. Boyle had shown that all gases exhibit the same relationship between a change in temperature or pressure and the corresponding change in volume. J. L. Gay-Lussac had shown that gases always combine in simple whole-number volume proportions and had rediscovered the earlier findings of Charles, which had not been published.

Dalton's Theory

One early theorist was John Dalton, best known for his atomic theory. Dalton believed that gases were made up of tiny particles, which he thought were atoms. He thought that these atoms were stationary and in contact with one another and that heat was a material substance, called caloric, that was contained in shells around the atom (these shells of caloric were actually what was in contact). When a gas was heated, the amount of caloric was increased, the shells became larger, and the gas expanded. Dalton did not accept Gay-Lussac's findings about combining volumes of gases, perhaps because it could not be explained by his theory.

Avogadro's Hypothesis

A different theory from Dalton's that could explain the combining volumes of gases was proposed by the Italian physicist Amadeo Avogadro in 1811. According to his theory, under given conditions of temperature and pressure, a given volume of any gas contains a definite number of particles. From the earlier observation that one volume of hydrogen gas and one volume of chlorine gas react to form two volumes of hydrogen chloride gas he deduced that the particles in gaseous hydrogen or chlorine could not be single atoms, but must be some combination of atoms. He called this combination a molecule. He reasoned that the two volumes of hydrogen chloride that are formed must contain twice as many particles as either single volume of hydrogen or chlorine. Thus, if there were 100 particles each of hydrogen and chlorine, there would be 200 particles of hydrogen chloride produced; but there could be only 100 particles produced if the original particles of hydrogen and chlorine were indivisible atoms, since each particle of hydrogen chloride contains both hydrogen and chlorine. An assumption that there are two atoms in a molecule of gaseous hydrogen or chlorine and one atom each of hydrogen and chlorine in a molecule of hydrogen chloride preserves both the hypothesis of indivisible atoms and the hypothesis of equal numbers of particles in equal volumes of gases. Similar reasoning would allow a larger even number of atoms in the molecules of hydrogen or chlorine, but Avogadro favored a rule of simplicity, using the smallest possible number. In the model of gases proposed by Avogadro, the particles were not in contact and much of the volume of the gas was empty space.

Cannizaro's Compromise

Avogadro's theory was not well accepted; most responses were very critical. Meanwhile, Dalton's theory prompted extensive experimentation and especially the determination of combining weights of the elements. Many shortcomings of Dalton's theory were uncovered, and although a number of modifications were suggested, none were very successful. It was not until 1858 that the Italian chemist Stanislao Cannizaro suggested a merging of Avogadro's and Dalton's theories. The acceptance of this revised theory was assisted by the acceptance by physicists at about the same time of the kinetic-molecular theory of gases that was first proposed in 1738 by Daniel Bernoulli.

____________________

The Columbia Encyclopedia, Sixth Edition Copyright© 2004, Columbia University Press. Licensed from Lernout & Hauspie Speech Products N.V. All rights reserved.

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...of surrounding molecules. The corresponding...surface of one molecule is in contact with...surface of the given molecule with the A-surfaces of neighboring molecules is Sca and the...now remove the molecule AC to a vapor phase...
...interconversion of two different forms isomers of a molecule, which have the same chemical constitution...different shapes. They constructed a molecule containing two linked propeller-like...propellers sit on opposite sides of the molecule: the so-called trans isomer. But...
...solution, the DNA molecule strives to straighten...the surrounding water molecules, the DNA molecule begins to writhe like...Lb, where L is the molecules length and b is determined...degree to which the DNA molecule resists thermal motion...
...Used here to refer to molecules such as lipids that do not...domains of life. Ligand A molecule that binds to, or is bound by, another molecule. Lipid Any of a diverse...Lipopolysaccharide A complex molecule consisting of both lipid...
...made with type D ribose molecules. Why not with type L ribose...the site in the transfer RNA molecules to which amino acids are bound...system starts copying RNA molecules. If things were the same...the interaction of the RNA molecule with the primitive replicating...
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"The DNA Molecule": May Swenson Confronts Modern Paradigms...Swensons 1970 book Iconographs, "The DNA Molecule" is a stunningly successful shaped poem...speakers opening assertion that "the DNA molecule / is the Nude Descending a Staircase...
...the F and M mtDNA molecules in marine mussels...established that the male molecule possesses higher...the M and F mtDNA molecules are summarized in...species, the M molecule exhibited significantly...genes from an M molecule in every individual...that masculinized F molecules, if present, occur...
...the "mixed" molecules found here could...changes along the molecule or by gaining...publication. A related molecule was also recently...2006). The snake molecules are 93% similar...code a precursor molecule of 218 amino acids...processing, since the molecules purified from the...
...Soluble Cell Adhesion Molecules. by Yu Chen , Regina...intercellular adhesion molecule-1 (sICAM-1...Circulating cell adhesion molecules and death in patients...leukocyte adhesion molecule during atherogenesis...glutamine on adhesion molecule expression and leukocyte...Circulating adhesion molecules VCAM-1, ICAM...
...Analysis of the Cell Adhesion Molecule Sticks-and-stones Reveals...functionally redundant cell adhesion molecules, either Dumbfounded/Kin...Stones (SNS) cell adhesion molecule (Bour et al. 2000). Mutants...guided by cell-adhesion molecules to points of cell contact...
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...electronically generated molecules can be thoroughly...days. Simulating a molecule helps scientists...of one contorted molecule match those of another...wraps itself around molecules of oxygen in the...together to make the molecule. He believes the...the heart of the molecules binding pocket and...
...called biological macro molecules, based on their large...compared to most inorganic molecules. If one could stretch it out, a single DNA molecule can be more than a meter...enormous variety of molecules called receptors that...molecular signals; the molecule that a particular receptor...
Important Liver Molecule Discovered Chemists at the University...in determining the structure of a key molecule in the liver responsible for metabolizing...percent of drugs taken by humans. The molecule, known as PXR; is the master regulator...
Detecting a Single Molecule at a Time by Richard...and count individual molecules. So far, Yeungs method...for only one type of molecule, but the potential...The fish is the target molecule, the hook is the antibody...When all of the target molecules in a sample have been...
Pieter Dorrestein: Small Molecules, Big Goals by Andrea Gawrylewski...structures - not just small molecule crystallography, but large molecule crystallography," Dorrestein...intention of building small molecules that interact with proteins...
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...tiny but mighty. The equol molecule chemically binds itself to...enlarged prostate."This molecule is remarkable," said Kenneth...made in the body. The equol molecules function as "handcuffs...were more prone to create the molecule from soy than others. Some...
...Breakthrough; University Study Pins Hopes on Molecule. Byline: BY ASHLEY WRAY Daily Post...RESEARCHERS at Liverpool University believe a molecule that can "taste sweets" could lead...Science, announced the discovery of the molecule in the intestine. Prof Shirazi-Beechey...
Found, Super Molecule to Kill Prostate Cancer Cells. Byline...SCIENTISTS have discovered a super-molecule which targets and destroys prostate...attacking the disease directly, the molecule - known as F77 - helps the immune system...
Super-Molecule Which Destroys Prostate Cancer. Byline...SCIENTISTS have discovered a super-molecule which targets and destroys prostate cancer...attacking the disease directly, the molecule - known as F77 - helps the immune system...
The Magic Molecule That Kills Prostate Cancer Cells. Byline...SCIENTISTS have discovered a super-molecule which targets and destroys prostate cancer...attacking the disease directly, the molecule - known as F77 - helps the immune system...
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...arrangement of atoms in the molecule. Molecules differ in size and...cases two or more molecules will combine to form a single larger molecule, or a large molecule will be broken up into several smaller molecules. Molecules can assume...
CHIRAL MOLECULE another term for optical isomer. See Stereoisomers under isomer . ____________________ Copyright 2009 Columbia University Press. Used with the permission of Columbia University Press. All rights reserved.
FLUXIONAL MOLECULES molecules that exhibit rapid intramolecular rearrangements among their component...the same number of component atoms. At equilibrium, fluxional molecules may manifest many different isomers and fluctuate rapidly among...
...lowered, clusters of molecules form through hydrogen...bonding, with each molecule being linked to...three different molecule populations. At...temperatures single molecules are the rule, with...way in which water molecules interact with each...Ice In ice, each molecule forms the maximum...
...measures the number of molecules of compound upon...enzyme works per molecule of enzyme per second...That means that one molecule of the enzyme can cause a million molecules of carbon dioxide...only one substrate molecule which is appropriate...small nonprotein molecules. These include...
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