NUCLEIC ACID

any of a group of organic substances found in the chromosomes of living cells and viruses that play a central role in the storage and replication of hereditary information and in the expression of this information through protein synthesis. In most organisms, nucleic acids occur in combination with proteins; the combined substances are called nucleoproteins. Nucleic acid molecules are complex chains of varying length. The two chief types of nucleic acids are DNA (deoxyribonucleic acid), which carries the hereditary information from generation to generation, and RNA (ribonucleic acid), which delivers the instructions coded in this information to the cell's protein manufacturing sites.

A substance that he called nuclein (now known as DNA) was isolated by 1869 by Friedrich Miescher, but it was only in the last half of the 20th cent. that that research revealed its significance as the material of which the gene is composed, and thus its function as the chemical bearer of hereditary characteristics. RNA was first made by laboratory synthesis in 1955. In 1965 the nucleotide sequence of tRNA was determined, and in 1967 the synthesis of biologically active DNA was achieved. The amount of RNA varies from cell to cell, but the amount of DNA is normally constant for all typical cells of a given species of plant or animal, no matter what the size or function of that cell. The amount doubles as the chromosomes replicate themselves before cell division takes place (see mitosis); in the ovum and sperm the amount is half that in the body cells (see meiosis).

DNA

The chemical and physical properties of DNA suit it for both replication and transfer of information. Each DNA molecule is a long two-stranded chain. The strands are made up of subunits called nucleotides, each containing a sugar (deoxyribose), a phosphate group, and one of four nitrogenous bases, adenine, guanine, thymine, and cytosine, denoted A, G, T, and C, respectively. A given strand contains nucleotides bearing each of these four. The information carried by a given gene is coded in the sequence in which the nucleotides bearing different bases occur along the strand. These nucleotide sequences determine the sequences of amino acids in the polypeptide chain of the protein specified by that gene.

Between the genes, or coding loci, on the DNA of higher organisms, there are long portions of DNA, often referred to as "junk" DNA, that code no proteins. Sometimes junk DNA occurs within a gene; when this occurs, the coding portions are called exons and the noncoding (junk) portions are called introns. Junk DNA makes up 97% of the DNA in the human genome. Little is known of its purpose.

In 1953 the molecular biologists J. D. Watson, an American, and F. H. Crick, an Englishman, proposed that the two DNA strands were coiled in a double helix. In this model each nucleotide subunit along one strand is bound to a nucleotide subunit on the other strand by hydrogen bonds between the base portions of the nucleotides. The fact that adenine bonds only with thymine (A—T) and guanine bonds only with cytosine (G—C) determines that the strands will be complementary, i.e., that for every adenine on one strand there will be a thymine on the other strand. It is the property of complementarity between strands that insures that DNA can be replicated, i.e., that identical copies can be made in order to be transmitted to the next generation.

RNA and Protein Synthesis

In order to be expressed as protein, the genetic information must be carried to the protein-synthesizing machinery of the cell, which is in the cell's cytoplasm (see cell). One form of RNA mediates this process. RNA is similar to DNA, but contains the sugar ribose instead of deoxyribose and the base uracil (U) instead of thymine. To initiate the process of information transfer, one strand of the double-stranded DNA chain serves as a template for the synthesis of a single strand of RNA that is complementary to the DNA strand (e.g., the DNA sequence AGTC… will specify an RNA sequence UCAG…). This process is called transcription and is mediated by enzymes.

The newly synthesized RNA, called messenger RNA, or mRNA, moves quickly to bodies in the cytoplasm called ribosomes, which are composed of two particles made of protein bound to ribosomal RNA, or rRNA. Each ribosome is the site of synthesis of a polypeptide chain. Several ribosomes attach to a single mRNA so that many polypeptide chains are synthesized from the same mRNA; each cluster of an mRNA and ribosomes is called a polyribosome or polysome. The nucleotide sequence of the mRNA is translated into the amino acid sequence of a protein by adaptor molecules composed of a third type of RNA called transfer RNA, or tRNA. There are many different species of tRNA, with each species binding one of 20 amino acids.

In protein synthesis, a nucleotide sequence along the mRNA does not specify an amino acid directly; rather, it specifies a particular species of tRNA. For example, in coding for the amino acid tyrosine, a nucleotide sequence of mRNA is complementary to a portion of a tyrosine-tRNA molecule. As each specified tRNA associates with its complementary space on the mRNA, the amino acid is added onto the lengthening protein chain and the tRNA is released. When the protein chain is complete, it is released from the ribosome.

The particular sequence of amino acids in each polypeptide chain is determined by the genetic code. Starting at one end of the mRNA strand, each 3-nucleotide sequence, or codon, specifies, via complementary tRNA sequences, one amino acid, and the series of such codons in the mRNA specifies a polypeptide chain. Although a "vocabulary" of 64 words, or specifications, is theoretically possible with 4 different nucleotides taken three at a time, there are only 20 amino acids to be specified. However, several triplets may code for the same amino acid; for example UAU and UAC both code for the amino acid tyrosine. In addition, there are some codons that do not code for amino acids but code for polypeptide chain initiation and polypeptide chain termination. The code is also nonoverlapping; i.e., a nucleotide in one codon is never part of either adjacent codon. The code seems to be universal in all living organisms.

The determination of the mechanism of protein synthesis has increased understanding of many genetic processes and permitted such developments as bioengineering. Some mutagens, or mutation-inducing agents, cause the substitution of one nucleotide for another in an mRNA strand; other mutagens cause deletion or addition of nucleotides. Decoding, or reading, of such strands will be altered.

Metabolic regulation has been studied to determine how the genes that control enzyme synthesis can be switched on and off when certain substances are present. For example, in the process known as induction, bacteria synthesize the enzyme β-galactosidase only when lactose is present. Induction has been linked to the activity at a so-called operator site on a chromosome. When the operator site is open, the genes it controls function freely; when it is blocked, as by a repressor molecule, the genes it controls also do not function.

Bibliography

See J. D. Watson, The Double Helix: A Personal Account of the Discovery of the Structure of DNA (1968) and DNA: The Secret of Life (2003); R. L. Adams et al., ed., The Biochemistry of the Nucleic Acids (1986); V. K. McElheny, Watson and DNA: Making a Scientific Revolution (2003).

____________________

The Columbia Encyclopedia, Sixth Edition Copyright© 2004, Columbia University Press. Licensed from Lernout & Hauspie Speech Products N.V. All rights reserved.

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books on: Nucleic Acid  - 530 results

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...the capacity for staining depends upon this substance. What, then, is nucleic acid? Are there many nucleic acids, or but one? And what is the function of nucleic acid in the cell? It is alleged by some that the genes in the chromosomes...
...Nucleoproteins are compounds composed of nucleic acids, associated with protein. The protein associated with nucleic acid seems to be of a relatively simple type -- mostly histone. Nucleic acids exist in the form of complicated...
...258. Suggests that nucleic acid functions as a template...governing the order of amino acids in peptide chains as well as their order in nucleic acids. Fraenkel-Conrat H. 1956. "The Role of the Nucleic Acid in the Reconstitution...
...that specificity is carried by the nucleic acid and not by the protein. In these...procedures were used for separating the nucleic acid from the protein. Plate VII...stage in this process. The isolated nucleic acid was found to be infective for...
...which the nucleic acid is obtained. Horstadius...Danielli also injected nucleic acids into sea-urchin...the source of the nucleic acid. It is therefore...nucleotides in nucleic acids closely corresponds...between protein and nucleic acid is possible. If...
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...terminates CG3231 after amino acid 491 (Figure 2A). While...The first 76 amino acids form a previously un...thought to be involved in nucleic acid binding (SUMMERS 1991...have abnormal nucleic acid content. This could...death. An increase in nucleic acid content associated...
...glycerol/2% ethanol and a complete amino acid mix deficient in histidine (GGE -His...synthetic media lacking the appropriate amino acid to check the segregation of markers. Spore...physically with PCNA and contains an amino acid sequence related to the PIP box that is...
...homeologous recombination: The 1447-amino-acid Sgslp is a 3-5 helicase that contains...deletion of the C-terminal 795 amino acids, including the entire helicase domain...2000; OBMOLOVA et al. 2000). An amino acid alignment analysis indicates that a lysine residue in MshSp (amino acid 187) is located where a phenylalanine...
...alleles 9-14; Table 1) by selection of uracil-dependent cells on minimal medium containing uracil and 5-fluoroorotic acid as described by GRIMM et al. (1988). The isolated ura~ clones were classified as ura4A or ura5 using the criss-cross...one representative was kept. Standard minimal medium (MMA) consists of 0.67% Difco yeast nitrogen base without amino acids, 1% glucose, and 1.8% agar. The other standard media, yeast extract agar (YEA), malt extract agar (MEA), and...
...and contains a 3arrow right5 exonuclease domain at its C terminus (CHEN et al. 2002; TUCKER et al. 2002). Single amino acid substitutions of catalytic residues in the Ccr4 exonuclease domain abolish its mRNA deadenylase activity in vivo and mimic most...
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...Locking Down Locked Nucleic Acids by Paul D. Thacker Boulder...marketing a novel class of nucleic acid analogs called locked nucleic acids (LNAT(TM)). Sporting...higher affinity for native nucleic acids, and enhanced resistance...
The First Automated Amino Acid Analyzer by Terry Sharrer Frederick...presented the first complete amino acid sequence of a protein (insulin...a recorder to analyze amino acid fragments as they emerged on...todays automated protein and nucleic acid analyzers and is now in...
...isolating and purifying nucleic acids into small plastic vessels...problems besetting the nucleic acid isolation and purification...is. From there the acids precipitate into the...scientists have an amount of nucleic acid at their disposal that...
...themselves. These are the two slightly different nucleic acids, ribonucleic acid (RNA) and deoxyribonucleic acid (DNA). Like enzymatic protein molecules, nucleic acids are long and unbranched, formed from subunits...
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...without the need to culture, by using nucleic acid amplification techniques. This...bacterium cells to release their nucleic acid. Target-capture technologies...which partially purifies the target nucleic acid before the amplification step...
...structure for the salt of deoxyribose nucleic acid (DNA), the two authors of the...bodies. Another candidate were nucleic acids. These chemicals were complex...turned their attention to one nucleic acid in particular, DNA. Using X...
...Ossett, West Yorkshire. QUESTION After cremation, do your ashes still contain your DNA? DEOXYRIBONUCLEIC acid (DNA) is a nucleic acid containing the genetic instructions for the development and functioning of living organisms. Its double helix...
...identification of infectious diseases. "The market is currently dominated by lateral flow assays, and assays based upon nucleic acid detection. "These are limited in their sensitivity, speed, robustness, availability in convenient format and ability...
...Meanwhile, the lawyers of Ruben Ecleo Jr. are asking the court to reset to another date the scheduled taking of deoxyribo nucleic acid (DNA) samples from the brothers of Ecleos deceased wife Alona, which would later be matched with Alonas DNA after...
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encyclopedia articles on: Nucleic Acid  - 57 results

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NUCLEIC ACID any of a group of organic...synthesis. In most organisms, nucleic acids occur in combination with...called nucleoproteins. Nucleic acid molecules are complex chains...The two chief types of nucleic acids are DNA (deoxyribonucleic...
...noncellular structure composed mainly of nucleic acid within a protein coat. Viruses...as temperate phages, the viral nucleic acid becomes integrated into the host...properties as size, the type of nucleic acid they contain, the structure of...
...composed of protein, an inner core of nucleic acid either deoxyribonucleic acid (DNA...outside the bacterium. The injected nucleic acid is the viral genetic material...enzymes, as well as more phage nucleic acid. The viral proteins and nucleic...
...addition of single amino acids to the chain; and termination of amino-acid additions and release...sequences is carried by a nucleic acid molecule called messenger RNA (see nucleic acid ). Proteins are...mainly for their amino acids, which the body...
...interfering with the synthesis of nucleic acids and are especially effective against...pyrimidines, substances that are nucleic acid subunits; the purine analog azothioprine...Most substances that inhibit nucleic acid synthesis, such as nitrogen...
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